analyseMCMC_chains.f90 File Reference

(AnalyseMCMC version 0.7.1, revision 448, hash 2f54722 (2013-11-19))

Plot chains (posterior, parameters, jumps, etc.) for analyseMCMC. More...

Functions/Subroutines
subroutine	chains (exitcode)
	Plot chains (posterior, parameters, jumps, etc.) for analyseMCMC. More...
subroutine	plot_posterior_chain (exitcode)
	Plot posterior chain. More...
subroutine	plot_parameter_chains (exitcode)
	Plot chains for each parameter. More...
subroutine	plot_par_l (exitcode)
	Plot L vs parameter value. More...
subroutine	plot_jump_sizes (exitcode)
	Plot jump sizes. More...
subroutine	plot_acorr_chains (exitcode)
	Plot autocorrelations for each parameter. More...
subroutine	plot_rhat_chains (exitcode)
	Plot R-hat vs. iteration number. More...
subroutine	plot_posterior_snr_axes (itermin, itermax, logpmin, logpmax)
	Plot the vertical axes for the log Posterior plot: logP on the left, sqrt(2logP)~SNR on the right. More...

Detailed Description

Plot chains (posterior, parameters, jumps, etc.) for analyseMCMC.

Function/Subroutine Documentation

subroutine chains

(

integer, intent(out)

exitcode

)

Plot chains (posterior, parameters, jumps, etc.) for analyseMCMC.

Return values

exitcode

Exit status code (0=ok)

References plot_acorr_chains(), plot_jump_sizes(), plot_par_l(), plot_parameter_chains(), plot_posterior_chain(), and plot_rhat_chains().

Referenced by analysemcmc().

subroutine plot_posterior_chain

(

integer, intent(out)

exitcode

)

Plot posterior chain.

Return values

exitcode

Exit status code (0=ok)

References pginitl(), pgscidark(), and plot_posterior_snr_axes().

Referenced by chains().

subroutine plot_parameter_chains

(

integer, intent(out)

exitcode

)

Plot chains for each parameter.

Return values

exitcode

Exit status code (0=ok)

References pginitl(), pgscidark(), report_undefined_parameter(), rev180(), rev24(), and rev360().

Referenced by chains().

subroutine plot_par_l

(

integer, intent(out)

exitcode

)

Plot L vs parameter value.

Return values

exitcode

Exit status code (0=ok)

References pginitl(), report_undefined_parameter(), rev180(), rev24(), and rev360().

Referenced by chains().

subroutine plot_jump_sizes

(

integer, intent(out)

exitcode

)

Plot jump sizes.

Return values

exitcode

Exit status code (0=ok)

References pginitl(), and report_undefined_parameter().

Referenced by chains().

subroutine plot_acorr_chains

(

integer, intent(out)

exitcode

)

Plot autocorrelations for each parameter.

Return values

exitcode

Exit status code (0=ok)

References pginitl(), and report_undefined_parameter().

Referenced by chains().

subroutine plot_rhat_chains

(

integer, intent(out)

exitcode

)

Plot R-hat vs. iteration number.

Return values

exitcode

Exit status code (0=ok)

References pginitl().

Referenced by chains().

subroutine plot_posterior_snr_axes	(	real, intent(in)	itermin,
		real, intent(in)	itermax,
		real, intent(in)	logpmin,
		real, intent(in)	logpmax
	)

Plot the vertical axes for the log Posterior plot: logP on the left, sqrt(2logP)~SNR on the right.

Parameters

itermin	Minimum iteration number in plot (horizontal axis)
itermax	Maximum iteration number in plot (horizontal axis)
logpmin	Minimum log Posterior in plot (vertical axis)
logpmax	Maximum log Posterior in plot (vertical axis)

Referenced by plot_posterior_chain().